1st IEEE Symposium on
Biological Data Visualization

23-24 October 2011 / Providence, RI @ IEEE VisWeek

BioVis 2011 Abstract

Toward Systems-Level Visualizations of Molecular Networks on Large-Scale, High-Resolution Displays Jillian Aurisano, James A. Radosevich, Jason Leigh
The scale and complexity of high-throughput experimental techniques call for novel approaches to biological network visualization. Large, high resolution displays present the opportunity to communicate information in a way that cannot be matched on small, low-resolution displays and therefore, new approaches to biological network visualization ought to take advantage of these platforms. We have developed a prototype for tiled-display walls that integrates and visualizes over a thousand human molecular pathways from the Pathway Commons database in one view. This prototype will serve as a platform for the future development of novel approaches to visualizing the interconnected nature of biological pathways.

BioVis 2011 Papers and Abstracts

<a href="../../papers_abstracts/papers/104.html">GenAMap: Visualization Strategies for Structured Association Mapping</a> <a href="../../papers_abstracts/papers/106.html">A Visual Analysis System for Metabolomics Data</a> <a href="../../papers_abstracts/papers/111.html">The Galaxy Track Browser: Transforming the Genome Browser from Visualization Tool to Analysis Tool</a> <a href="../../papers_abstracts/papers/113.html">TIALA - Time Series Alignment Analysis</a> <a href="../../papers_abstracts/papers/118.html">MDMap : A System for Data-driven Layout and Exploration of Molecular Dynamics Simulations</a> <a href="../../papers_abstracts/papers/124.html">Evaluating the VIPER pedigree visualisation: detecting inheritance inconsistencies in genotyped pedigrees.</a> <a href="../../papers_abstracts/papers/129.html">Fiber Stippling: An Illustrative Rendering for Probabilistic Diffusion Tractography</a> <a href="../../papers_abstracts/papers/130.html">Parallel Contour-Buildup Algorithm for the Molecular Surface</a> <a href="../../papers_abstracts/papers/133.html">Visualization of Anisotropic Contact Potentials within Protein Structures</a> <a href="../../papers_abstracts/papers/134.html">Visual Exploration of Microbial Populations</a> <a href="../../papers_abstracts/papers/136.html">Quick2Insight: A User-Friendly Framework for Interactive Rendering of Biological Image Volumes</a> <a href="../../papers_abstracts/papers/140.html">Visual Analysis of Next-Generation Sequencing Data to Detect Overlapping Genes in Bacterial Genomes</a> <a href="../../papers_abstracts/papers/144.html">Visualizing Virus Population Variability From Next Generation Sequencing Data</a> <a href="../../papers_abstracts/papers/148.html">Metrics for Comparing Explicit Representations of Interconnected Biological Networks</a> <a href="../../papers_abstracts/papers/149.html">RuleBender: Integrated Visualization for Biochemical Rule-Based Modeling</a> <a href="../../papers_abstracts/papers/150.html">iHAT: interactive Hierarchical Aggregation Table</a> <a href="../../papers_abstracts/papers/151.html">Semantically Steered Visual Analysis of Highly Detailed Morphometric Shape Spaces</a> <a href="../../papers_abstracts/papers/158.html">Modeling and Visualization of Receptor Clustering on the Cellular Membrane</a> <a href="../../papers_abstracts/papers/160.html">HiTSEE: A Visualization Tool for Hit Selection and Analysis in High-Throughput Screening Experiments</a> <a href="../../papers_abstracts/papers/168.html">EVEVis: A Multi-Scale Visualization System for Dense Evolutionary Data</a> <a href="../../papers_abstracts/abstracts/102.html">NGS Explorer: An Application for Visually Contextualizing and Interrogating Multivariate Omics Data</a> <a href="../../papers_abstracts/abstracts/103.html">Cell Illustrator/JS: Social Systems Biology</a> <a href="../../papers_abstracts/abstracts/104.html">Navigation and Exploration System for Stem Cell Image Data</a> <a href="../../papers_abstracts/abstracts/107.html">Seqeyes: A multi-scale interactive visualization tool for structural variations</a> <a href="../../papers_abstracts/abstracts/109.html">Analysis-Ready Meshes of Neuronal Forests</a> <a href="../../papers_abstracts/abstracts/110.html">DCE-MRI-oriented Volume Rendering for Monitoring of Crohn's Disease</a> <a href="../../papers_abstracts/abstracts/113.html">FoldSynth: A physics-based interactive visualisation platform for proteins and other molecular strands</a> <a href="../../papers_abstracts/abstracts/115.html">Toward Systems-Level Visualizations of Molecular Networks on Large-Scale, High-Resolution Displays</a> <a href="../../papers_abstracts/abstracts/116.html">3D Reconstruction and Visualization of the Developing Drosophila Wing Imaginal Disc at Cellular Resolution</a> <a href="../../papers_abstracts/abstracts/117.html">Interactive visualization of multiscale biomedical data: an integrated approach</a> <a href="../../papers_abstracts/abstracts/119.html">Reconstructing Neural Structures from Sparse User Scribbles</a> <a href="../../papers_abstracts/abstracts/120.html">Visualizing Global Correlation in Large-Scale Molecular Biological Data</a> <a href="../../papers_abstracts/abstracts/121.html">VESPA: Visual Exploration and Statistics to Promote Annotation for Prokaryotic Genomes</a> <a href="../../papers_abstracts/abstracts/122.html">Visualizing Genetic Transmission Patterns in Plant Pedigrees</a> <a href="../../papers_abstracts/abstracts/123.html">CluMa-GO: Bring Gene Ontologies and Hierarchical Clusterings Together</a> <a href="../../papers_abstracts/abstracts/124.html">Animating Cell Biology for Research and Teaching</a> <a href="../../papers_abstracts/abstracts/125.html">3D Reconstruction and Analysis of Bat Flight Maneuvers from Sparse Multiple View Video</a> <a href="../../papers_abstracts/abstracts/126.html">Visualization of experimental design & workflows in biological experiments</a> <a href="../../papers_abstracts/abstracts/131.html">Spatially Continuous Change of Abstraction in Molecular Visualization</a> <a href="../../papers_abstracts/abstracts/132.html">Fast Tracing of Microtubule Centerlines in Electron Tomograms</a> <a href="../../papers_abstracts/abstracts/133.html">Light Microscopy-Based Reconstruction and Interactive Structural Analysis of Cortical Neural Networks</a> <a href="../../papers_abstracts/abstracts/134.html">KnomePathways: A Tool to View and Query Gene Interaction Networks in Individual Human Genomes</a> <a href="../../papers_abstracts/abstracts/135.html">G-nome Surfer: a Tabletop Interface for Collaborative Exploration of Genomic Visualization</a> <a href="../../papers_abstracts/abstracts/136.html">FvNano: A Virtual Laboratory to Manipulate Molecular Systems</a> <a href="../../papers_abstracts/abstracts/137.html">Lessons Learned from Tool Development for Animal Movement Analysis</a> <a href="../../papers_abstracts/abstracts/140.html">InBox: In-situ Multiple-Selection and Multiple-View Exploration of Diffusion tensor MRI Visualization</a>